Software / DevOps / Data Engineer, Bioinformatician
San Francisco Bay Area
BeyondCORE
Senior Engineer, DevOps / Core-platform
September 2014 to Present
TOMA Biosciences
Bioinformatician (Consultant)
February 2014 to September 2014
Innovative Drive
.NET Engineer (Consultant)
September 2013 to January 2014
Syapse Inc.
Bioinformatics Specialist
April 2013 to December 2013
Solazyme, Inc.
Bioinformatics Developer
May 2011 to April 2013
UC Davis, School of Medicine
Senior Systems Analyst
April 2006 to April 2011
* Developed solutions for SAML Single Sign-on integration. * Developed BeyondCore's entire DevOps stack in AWS using python / boto / fabric / SaltStack. * Responsible for configuration management, infrastructure security, and deployments. * Configured and Deployed centralized log management using SumoLogic and Web Security / IDS using AlertLogic. * Developed RESTful Web Services, using Java EE... * Developed solutions for SAML Single Sign-on integration. * Developed BeyondCore's entire DevOps stack in AWS using python / boto / fabric / SaltStack. * Responsible for configuration management, infrastructure security, and deployments. * Configured and Deployed centralized log management using SumoLogic and Web Security / IDS using AlertLogic. * Developed RESTful Web Services, using Java EE / Jersey / Sql2o. * Developed front-end visualizations and interactions using HTML5, JQuery / Underscore. * Responsible for software security, as well as the development of multitenancy, reporting, and data sharing capabilities. * Developed and maintain an in-house security enhanced fork of the eclipse Jetty Java Servlet container. * Co-engineered BeyondCore's Apps for Office add-in. * Developed the back-end API for Apps for Office, as well as the front-end for the Excel and PowerPoint Add-in.
What company does Matthew Shoa-Azar work for?
Matthew Shoa-Azar works for BeyondCORE
What is Matthew Shoa-Azar's role at BeyondCORE?
Matthew Shoa-Azar is Senior Engineer, DevOps / Core-platform
What industry does Matthew Shoa-Azar work in?
Matthew Shoa-Azar works in the Computer Software industry.
Who are Matthew Shoa-Azar's colleagues?
Matthew Shoa-Azar's colleagues are Andi Johan, Veronica Widjaja, Ricky Tjahyadi, Astri A., Ramin Modiri, Jeanine McKay, Rick McCartha, Preston Thom, Cheng Li, and Katherine Findlay
đź“– Summary
Senior Engineer, DevOps / Core-platform @ * Developed solutions for SAML Single Sign-on integration. * Developed BeyondCore's entire DevOps stack in AWS using python / boto / fabric / SaltStack. * Responsible for configuration management, infrastructure security, and deployments. * Configured and Deployed centralized log management using SumoLogic and Web Security / IDS using AlertLogic. * Developed RESTful Web Services, using Java EE / Jersey / Sql2o. * Developed front-end visualizations and interactions using HTML5, JQuery / Underscore. * Responsible for software security, as well as the development of multitenancy, reporting, and data sharing capabilities. * Developed and maintain an in-house security enhanced fork of the eclipse Jetty Java Servlet container. * Co-engineered BeyondCore's Apps for Office add-in. * Developed the back-end API for Apps for Office, as well as the front-end for the Excel and PowerPoint Add-in. From September 2014 to Present (1 year 4 months) Bioinformatician (Consultant) @ * Designed single-page web applications used for visualizing genomic data-sets and metrics, using Python / Django / KnockoutJS. * Designed high-throughput analysis pipelines used for performing mutation, coverage, and read-mapping analysis in Java and Python. * Instrumental in all stages of the agile software development life cycle, including gathering requirements, implementation, and testing. * Designed and implemented the hybrid internal / cloud-based IT infrastructure. * Developed solutions for securing electronic patient health records. From February 2014 to September 2014 (8 months) .NET Engineer (Consultant) @ * Lead UI / UX Engineer for building an image capture and analysis application, using the .Net platform * Developed algorithms for performing quantitative analysis of captured images, as well as laser calibration, using C# From September 2013 to January 2014 (5 months) Bioinformatics Specialist @ * Developed client-facing web applications in Python / Django / BackboneJS, used for capturing biological data / workflows (e.g. Variant Calls, Sample Accessioning, etc.) * Technical lead for all Syapse clients needing algorithm, database and API support / training * Technical lead for integrating datasets from biological / clinical databases, such as the TCGA (http://cancergenome.nih.gov/), with the Syapse software platform From April 2013 to December 2013 (9 months) Bioinformatics Developer @ * Designed single-page web applications in PHP / CodeIgniter / JQuery used for the following: - Tracking, visualizing, and reporting laboratory information - Quality Control for downstream manufacturing - Oil profile analyses for the Discovery, Molecular Biology, Strain Development, and Fermentation groups of Solazyme * Responsible for the de novo assembly and functional annotation of numerous micro-algal and higher plant genomes / transcriptomes. * Developed high-throughput bioinformatics pipelines, using C / C++ and Python, used for differential gene expression analysis. * Designed / Configured grid computing environments using Sun / Open Grid Engine, for very high-throughput sequence analysis and clustering. From May 2011 to April 2013 (2 years) Senior Systems Analyst @ * Technical lead for systems engineering projects in the School of Medicine * Administered Linux systems for research labs in Medical Microbiology / Immunology, Physiology, and Biochemistry. * Configured user accounts, group membership, and group policies in Windows Active Directory. * Responsible for server consolidation, by employing virtualization technologies, as well as testing new system designs in a pre-production environment. * Responsible for patch management, network security, and data encryption for all LAN / WAN environments in the School of Medicine. From April 2006 to April 2011 (5 years 1 month) Master of Science (M.S.), Bioinformatics, GPA: 4.00 @ New York UniversityBachelor of Arts (B.A.), Computer Science @ University of California, Santa Cruz Matthew Shoa-Azar is skilled in: Bioinformatics, Computational Biology, Python, R, Perl, Genomics, Biotechnology, Sequence Analysis, Lifesciences, Software Development, Data Analysis, Machine Learning, Genetics, Data Mining, Proteomics
Introversion (I), Sensing (S), Thinking (T), Perceiving (P)
1 year(s), 8 month(s)
Unlikely
Likely
There's 94% chance that Matthew Shoa-Azar is seeking for new opportunities
Enjoy unlimited access and discover candidates outside of LinkedIn
Trusted by 400K users from
76% of Fortune 500 companies
The most accurate data ever
Hire Anyone, Anywhere
with ContactOut today
Making remote or global hires? We can help.
No credit card required